#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 71-72-6
1 HL_5TBW_0275TBW0.759541 LSU rRNAC1239A1240U1241G1242G1243C1248G1249cWW
2 HL_3IVK_0053IVK0.00001T-loop relatedMclass I ligase productG92U93U94A95A96A98C99cWWntSH

3D structures

Complete motif including flanking bases
SequenceCounts
CAUGGAAGUCG1
GUUAAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
AUGGAAGUC1
UUAAAA1

Release history

Release3.773.783.79
Date2023-12-062024-01-032024-01-03
StatusNew id, 2 parentsExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • T-loop related (1)
  • (1)
  • Basepair signature
    cWW-tSH-F-F-F-F
    Heat map statistics
    Min 0.76 | Avg 0.38 | Max 0.76
    Help

    Coloring options:

    HL_5TBW_027:HL_5TBW_027 = 0HL_5TBW_027:HL_3IVK_005 = 0.7595HL_3IVK_005:HL_5TBW_027 = 0.7595HL_3IVK_005:HL_3IVK_005 = 0HL_5TBW_027HL_3IVK_005Discrepancy0.000.200.400.60
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