Motif HL_91058.1 Version HL_91058.1 of this group appears in releases 3.80 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5WTI_001 | 5WTI | 0.8806 | 3 | B | RNA (123-MER) | C | 12 | U | 13 | U | 16 | G | 18 | cWW | cWH |
| 2 | HL_6VMY_004 | 6VMY | 0.7496 | 3 | A | Cobalamin riboswitch | C | 287 | C | 288 | G | 291 | G | 293 | cWW | ncWH |
| 3 | HL_8S95_003 | 8S95 | 0.7121 | 3 | C | Enterovirus 5' cloverleaf cis-acting replication element | C | 67 | C | 68 | G | 71 | G | 73 | cWW | ncWH |
| 4 | HL_4V88_190 | 4V88 | 0.6772 | 2 | A6 | SSU rRNA | C | 230 | U | 231 | G | 234 | G | 235 | ncWW | |
| 5 | HL_3SIU_002 | 3SIU | 0.4816 | 3 | F | U4atac snRNA | C | 40 | G | 41 | U | 44 | G | 46 | cWW | |
| 6 | HL_6WBR_002 | 6WBR | 0.0000 | 3 | B | RNA (94-MER) | C | 56 | U | 57 | G | 60 | G | 62 |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUUUGG | 1 |
| CCAAGCG | 1 |
| CCACGUG | 1 |
| CUUCGG | 1 |
| CGCAUAG | 1 |
| CUUCGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUUUG | 1 |
| CAAGC | 1 |
| CACGU | 1 |
| UUCG | 1 |
| GCAUA | 1 |
| UUCGU | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: