#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 11 12 13 14 151-1510-14
1 HL_6D3P_0016D3P0.00000 ARNA (45-MER)C13||||12_566A14||||12_566U15||||12_566C16||||12_566C17||||12_566G18||||12_566A19||||12_566G20||||12_566U21||||12_566U22||||12_566G23||||12_566C24||||12_566A25||||12_566A26||||12_566G27||||12_566cWWtWH
2 HL_6D3P_0026D3P0.00000PseudoknotARNA (45-MER)C13A14U15C16C17G18A19G20U21U22G23C24A25A26G27cWWtWH

3D structures

Complete motif including flanking bases
SequenceCounts
CAUCCGAGUUGCAAG2
Non-Watson-Crick part of the motif
SequenceCounts
AUCCGAGUUGCAA2

Release history

Release3.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-17
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Pseudoknot (1)
  • Basepair signature
    cWW-tWH-R-R-R-R-R-R-R-R-R-R
    Heat map statistics
    Min 0.00 | Avg 0.00 | Max 0.00
    Help

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