Motif HL_94239.1 Version HL_94239.1 of this group appears in releases 3.92 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8Y05_001 | 8Y05 | 0.0937 | 4 | B | RNA (29-MER) | C | -12 | U | -11 | G | -6 | cWW |
| 2 | HL_5ID6_001 | 5ID6 | 0.0000 | 4 | G | RNA (21-mer) | C | 11 | U | 12 | G | 17 | cWW |
| 3 | HL_8Y03_001 | 8Y03 | 0.0004 | 4 | G | RNA (41-MER) | C | 11 | U | 12 | G | 17 | cWW |
| 4 | HL_8H9D_001 | 8H9D | 0.0979 | 4 | G | RNA (21-mer) | C | 11 | U | 12 | G | 17 | cWW |
| 5 | HL_8Y0B_001 | 8Y0B | 0.1433 | 3 | B | RNA (53-MER) | C | -11 | U | -10 | G | -6 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAAGUG | 4 |
| CUGUUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAGU | 4 |
| UGUU | 1 |
Coloring options: