#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 61-62-5
1 HL_5TBW_0125TBW0.906101 LSU rRNAC543C544U545C546G547G548ncWW
2 HL_2A64_0012A640.58830Aribonuclease P RNAG31G32U33U34U35C36cWW
3 HL_6N5P_0026N5P0.00001A cyclic di-AMP riboswitchG58U59A61A62G63C64ncWW
4 HL_361D_001361D0.84550ARNA (20-mer)G86G87C88G89A89|||AC90cWWntSH

3D structures

Complete motif including flanking bases
SequenceCounts
CCUCGG1
GGUUUC1
GUGAAGC1
GGCGAC1
Non-Watson-Crick part of the motif
SequenceCounts
CUCG1
GUUU1
UGAAG1
GCGA1

Release history

Release3.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusNew id, > 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-R-R-R
    Heat map statistics
    Min 0.59 | Avg 0.63 | Max 0.91
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