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Motif HL_94618.2 Version HL_94618.2 of this group appears in releases 0.2 to 0.2

#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 41-4
1 HL_2IZM_0012IZM0.18022RRNA (19-mer)G8||||P_1A9||||P_1C11||||P_1C13||||P_1cWW
2 HL_2IZM_0022IZM0.20762SRNA (19-mer)G8||||P_1A9||||P_1C11||||P_1C13||||P_1cWW
3 HL_1U1Y_0011U1Y0.22732RRNA (17-mer)G7||||P_1A8||||P_1C10||||P_1C12||||P_1cWW
4 HL_7MSF_0017MSF0.16412RRNA (14-mer)C5||||P_1A6||||P_1C8||||P_1G10||||P_1cWW
5 HL_1ZDJ_0011ZDJ0.10802RRNA (8-mer)G8||||P_1A9||||P_1C11||||P_1C13||||P_1cWW
6 HL_1U1Y_0021U1Y0.10852SRNA (17-mer)G107||||P_1A108||||P_1C110||||P_1C112||||P_1cWW
7 HL_5MSF_0025MSF0.13662SRNA (18-mer)G7||||P_1A8||||P_1C10||||P_1C12||||P_1cWW
8 HL_1ZDJ_0021ZDJ0.08982SRNA (8-mer)G8||||P_1A9||||P_1C11||||P_1C13||||P_1cWW
9 HL_2BQ5_0012BQ50.00002RRNA (19-mer)G8||||P_1A9||||P_1U11||||P_1C13||||P_1cWW
10 HL_2IZN_0012IZN0.12592RRNA (19-mer)G8||||P_1A9||||P_1U11||||P_1C13||||P_1cWW
11 HL_2C50_0022C500.12332SRNA (19-mer)G8||||P_1A9||||P_1A11||||P_1C13||||P_1cWW
12 HL_2IZN_0022IZN0.14112SRNA (19-mer)G8||||P_1A9||||P_1U11||||P_1C13||||P_1cWW
13 HL_7MSF_0027MSF0.18252SRNA (14-mer)C5||||P_1A6||||P_1C8||||P_1G10||||P_1cWW
14 HL_2XZM_0122XZM0.15593A18S RRNAU442A443U445A448cWW
15 HL_5MSF_0015MSF0.21242RRNA (18-mer)G7||||P_1A8||||P_1C10||||P_1C12||||P_1cWW
16 HL_2C50_0012C500.24062RRNA (19-mer)G8||||P_1A9||||P_1A11||||P_1C13||||P_1cWW
17 HL_2BQ5_0022BQ50.39052SRNA (19-mer)G8||||P_1A9||||P_1U11||||P_1C13||||P_1ncWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAUCAC8
GAUUAC4
CAACAG2
GAUAAC2
UAAUUCA1
Non-Watson-Crick part of the motif
SequenceCounts
AUCA8
AUUA4
AACA2
AUAA2
AAUUC1
Annotations
  • (17)
    • Basepair signature
    Heat map statistics
    Min 0.05 | Avg 0.18 | Max 0.49
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