Motif HL_95414.1 Version HL_95414.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V19_017 | 4V19 | 0.4519 | 1 | A | LSU rRNA | A | 651 | G | 652 | C | 654 | U | 655 | U | 656 | cWW | ncWW |
| 2 | HL_4IOA_016 | 4IOA | 0.0000 | 4 | X | LSU rRNA | C | 552 | C | 553 | U | 557 | C | 559 | G | 560 | cWW | ncWB |
| 3 | HL_4V91_018 | 4V91 | 0.4108 | 1 | 1 | LSU rRNA | G | 763 | U | 764 | U | 766 | U | 767 | C | 768 | cWW | cwW |
| 4 | HL_4V88_131 | 4V88 | 0.4583 | 1 | A5 | LSU rRNA | G | 763 | U | 764 | U | 766 | U | 767 | C | 768 | cWW | cwW |
| 5 | HL_4V88_190 | 4V88 | 0.7445 | 1 | A6 | SSU rRNA | C | 230 | U | 231 | C | 233 | G | 234 | G | 235 | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCUUC | 2 |
| AGCCUU | 1 |
| CCUUAUGCG | 1 |
| CUUCGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCUU | 2 |
| GCCU | 1 |
| CUUAUGC | 1 |
| UUCG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: