Motif HL_96776.3 Version HL_96776.3 of this group appears in releases 3.54 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5J7L_200 | 5J7L | 0.6663 | 2 | Other HL | DA | LSU rRNA | C | 2795 | U | 2796 | U | 2798 | A | 2799 | G | 2801 | cWW | ncWW |
| 2 | HL_5TBW_002 | 5TBW | 0.0000 | 1 | 1 | LSU rRNA | C | 69 | A | 70 | A | 71 | C | 72 | G | 74 | cWW | cSW | |
| 3 | HL_4WF9_007 | 4WF9 | 0.2801 | 1 | X | LSU rRNA | A | 228 | A | 229 | A | 230 | A | 231 | U | 233 | cWW | cSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUUAAG | 1 |
| CAACCG | 1 |
| AAAAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUUAA | 1 |
| AACC | 1 |
| AAAU | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Other HL (1)
- Basepair signature
- cWW-cSW-R
- Heat map statistics
- Min 0.28 | Avg 0.38 | Max 0.77
Coloring options: