Motif HL_98557.5 Version HL_98557.5 of this group appears in releases 3.54 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2Y9H_003 | 2Y9H | 0.3861 | 3 | F | RNA (19-mer) | C | 11 | G | 12 | G | 16 | cWW |
| 2 | HL_5TBW_006 | 5TBW | 0.2063 | 2 | 1 | LSU rRNA | C | 208 | A | 209 | G | 212 | cWW |
| 3 | HL_4WF9_011 | 4WF9 | 0.0977 | 2 | X | LSU rRNA | C | 362 | A | 363 | G | 366 | cWW |
| 4 | HL_7RQB_011 | 7RQB | 0.0000 | 2 | 1A | LSU rRNA | C | 319 | A | 320 | G | 323 | cWW |
| 5 | HL_7A0S_011 | 7A0S | 0.1673 | 2 | X | LSU rRNA | C | 330 | U | 331 | G | 334 | cWW |
| 6 | HL_4V9F_011 | 4V9F | 0.2092 | 2 | 0 | LSU rRNA | G | 326 | A | 327 | C | 330 | cWW |
| 7 | HL_5J7L_143 | 5J7L | 0.2682 | 2 | DA | LSU rRNA | G | 319 | A | 320 | C | 323 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUAC | 2 |
| CGCGUG | 1 |
| CAUAG | 1 |
| CAAAG | 1 |
| CAGAG | 1 |
| CUCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUA | 3 |
| GCGU | 1 |
| AAA | 1 |
| AGA | 1 |
| UCA | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: