#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2break 3 4 5 61-62-32-4
1 IL_4CUV_0124CUV0.00002125S RRNAU169G170*U248U250G251A253cWWcWW
2 IL_1VW3_0021VW30.96114A21S ribosomal RNAA3273U3274*A25A27A29U32cWWcWWntSH

3D structures

Complete motif including flanking bases
SequenceCounts
UG*UUUGUA1
AU*AAAUAUUU1
Non-Watson-Crick part of the motif
SequenceCounts
*UUGU1
*AAUAUU1

Release history

Release1.15
Date2014-06-20
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_03252.1Only in the parent motif
IL_58586.3
Compare
IL_1VW3_002IL_4CUV_012IL_1NTB_004, IL_3U5H_088

Children motifs

Child motifCommon motif instancesOnly in IL_03252.1Only in the child motif
IL_45593.1
Compare
IL_4CUV_012IL_1VW3_002IL_4CUV_087, IL_1VX6_089, IL_3U5H_088
IL_74400.1
Compare
IL_1VW3_002IL_4CUV_012
Annotations
  • (2)
  • Basepair signature
    cWW-R-R-cWW
    Heat map statistics
    Min 0.96 | Avg 0.48 | Max 0.96
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