Motif IL_05221.1 Version IL_05221.1 of this group appears in releases 0.6 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 1-15 | 2-14 | 3-10 | 4-5 | 5-12 | 6-9 | 7-8 | 10-11 | 11-13 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5H_021 | 3U5H | 0 | 2 | 5 | LSU rRNA | G | 531 | A | 532 | A | 533 | G | 535 | U | 536 | A | 537 | G | 538 | * | U | 553 | A | 554 | U | 555 | U | 556 | A | 557 | A | 559 | G | 560 | C | 561 | cWW | cWW | tHW | cSH | cWH | tHS | cWW | ncSH | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAUGUAG*UAUUAUAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUGUA*AUUAUAG | 1 |
Release history
| Release | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.17 | 1.18 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 | 2014-09-04 | 2014-10-07 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-bif-tHW-cWH-tSW-cSH-cWH-cSH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: