Motif IL_05830.1 Version IL_05830.1 of this group appears in releases 0.1 to 0.4
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 1-14 | 2-13 | 8-9 | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_1FJG_026 | 1FJG | 0 | 0 | A | SSU rRNA | U | 605 | G | 606 | A | 607 | A | 608 | A | 609 | G | 610 | A | 611 | C | 612 | * | G | 628 | G | 629 | G | 630 | G | 631 | A | 632 | G | 633 | cWW | tSH | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGAAAGAC*GGGGAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GAAAGA*GGGA | 1 |
Release history
Release | 0.1 | 0.2 | 0.3 | 0.4 |
---|---|---|---|---|
Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 |
Status | New id, no parents | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_05830.1 | Only in the child motif |
---|---|---|---|
IL_28399.1 Compare | IL_1FJG_026 | IL_1S72_019, IL_3PYO_058 |
Coloring options: