Motif IL_06675.1 Version IL_06675.1 of this group appears in releases 1.17 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-6 | 4-5 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1VW3_086 | 1VW3 | 0.0000 | 2 | A | 21S ribosomal RNA | U | 2954 | G | 2955 | U | 2958 | C | 2959 | * | G | 3053 | A | 3054 | U | 3055 | A | 3056 | A | 3057 | G | 3058 | cWW | tSH | cWW | |
| 2 | IL_2QBG_106 | 2QBG | 0.5421 | 0 | B | 23S rRNA | C | 2889 | G | 2890 | U | 2891 | G | 2892 | * | C | 2806 | U | 2807 | G | 2808 | A | 2809 | A | 2810 | G | 2811 | cWW | tSH | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUAUC*GAUAAG | 1 |
| CGUG*CUGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUAU*AUAA | 1 |
| GU*UGAA | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in IL_06675.1 | Only in the parent motif |
|---|---|---|---|
| IL_25541.1 Compare | IL_1VW3_086 | IL_2QBG_106 | IL_4A1B_030 |
| IL_52509.1 Compare | IL_2QBG_106 | IL_1VW3_086 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-L-R-R-R-cWW
- Heat map statistics
- Min 0.54 | Avg 0.27 | Max 0.54
Coloring options: