Motif IL_52509.1 Version IL_52509.1 of this group appears in releases 0.5 to 1.15

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6	break		7		8		9		10	1-10	2-9	5-8	6-7
1	IL_2QBG_106	2QBG	0	0	B	23S rRNA	C	2806	U	2807	G	2808	A	2809	A	2810	G	2811	*	C	2889	G	2890	U	2891	G	2892	cWW	cwW	tHS	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CUGAAG*CGUG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UGAA*GU	1

Release history

Release	0.5	0.6	0.7	0.8	0.9	0.10	0.11	0.12	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15
Date	2011-12-08	2012-04-02	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-08	2013-05-04	2013-06-01	2013-07-01	2013-08-03	2013-08-31	2013-09-28	2013-11-05	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-20
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motif	Common motif instances	Only in IL_52509.1	Only in the child motif
IL_06675.1 Compare	IL_2QBG_106		IL_1VW3_086

Annotations: (1)
Basepair signature: cWW-cWW-L-L-tHS-cWW
Heat map statistics: Min 0.00 | Avg 0.00 | Max 0.00

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