#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5break 6 7 8 9 101-102-93-84-75-6
1 IL_7A0S_0567A0S0.37370Triple shearedX LSU rRNAC1529U1530C1531A1532G1533*C1491A1492A1493G1494G1495cWWtHSncWW
2 IL_7A0S_0707A0S0.36190Triple shearedX LSU rRNAU1848G1849G1850A1851G1852*C1865G1866A1867A1868A1869cWWtSHntHScWW
3 IL_2A64_0062A640.29820Triple shearedAribonuclease P RNAC347G348G349A350G351*C378G379A380A381G382cWWtSHtSHcWW
4 IL_2A64_0052A640.23490Triple shearedAribonuclease P RNAC297G298G299A300G301*C284G285A286A287G288cWWtSHntSHtHScWW
5 IL_8C3A_4808C3A0.23300Triple shearedCM SSU rRNAC1665G1666G1667A1668U1669*A1706G1707A1708A1709G1710cWWtSHntSHntWScWW
6 IL_4V88_4744V880.22190Triple shearedA6 SSU rRNAA1678G1679G1680A1681U1682*A1719G1720A1721A1722U1723cWWtSHtSHcWW
7 IL_4WFL_0014WFL0.00000Triple shearedA LSRP RNAU72C73G74A75G76*C91G92A93C94A95cWWcWBtSHtHScWW
8 IL_5J7L_2745J7L0.14200Triple shearedDA LSU rRNAG875C876A877A878G879*C898A899A900C901C902cWWcWBntSHtHScWW
9 IL_5J7L_0565J7L0.33610Triple shearedAA SSU rRNAG1272C1273A1274A1275G1276*C1259G1260A1261C1262C1263cWWncWBtSHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGGAG*CGAAG2
CUCAG*CAAGG1
UGGAG*CGAAA1
CGGAU*AGAAG1
AGGAU*AGAAU1
UCGAG*CGACA1
GCAAG*CAACC1
GCAAG*CGACC1
Non-Watson-Crick part of the motif
SequenceCounts
GGA*GAA5
UCA*AAG1
CGA*GAC1
CAA*AAC1
CAA*GAC1

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Triple sheared (9)
  • Basepair signature
    cWW-L-R-tSH-tHS-cWW
    Heat map statistics
    Min 0.12 | Avg 0.28 | Max 0.46
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