#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 51-53-4
1 IL_7A0S_0837A0S0.43050Single stack bendX LSU rRNAC2477C2478U2479*A2432G2433cWWcWW
2 IL_8VTW_0908VTW0.44730Single stack bend (H)1A LSU rRNAC2498C2499U2500*A2453G2454cWWcWW
3 IL_4WF9_0894WF90.42200Single stack bendX LSU rRNAC2525C2526U2527*A2480G2481cWWcWW
4 IL_5J7L_3915J7L0.30530DA LSU rRNAOMC2498C2499U2500*A2453G2454cWWcWW
5 IL_8C3A_0388C3A0.33670Single stack bend (H)1 LSU rRNAU1107A1108G1109*C965A966cWWcWW
6 IL_5TBW_0355TBW0.34650Single stack bend1 LSU rRNAU1111A1112G1113*C969A970cWWcWW
7 IL_4V9F_0054V9F0.20360Single stack bend0 LSU rRNAG182A183G184*C153C154cWWcWW
8 IL_5TBW_0045TBW0.19330Single stack bend1 LSU rRNAG56A57G58*C27C28cWWcWW
9 IL_8C3A_0048C3A0.15160Single stack bend (H)1 LSU rRNAG55A56G57*C26C27cWWncWW
10 IL_4WF9_0074WF90.00000Single stack bendX LSU rRNAG215A216G217*C186C187cWWcWW
11 IL_5J7L_2495J7L0.12610Single stack bendDA LSU rRNAG212A213G214*C183C184cWWcWW
12 IL_7A0S_0057A0S0.14760Single stack bendX LSU rRNAA189A190G191*C160U161cWWcWW
13 IL_7MLX_0017MLX0.12900RRNA (65-MER)G48A49U50*A37C38cWWcWW
14 IL_8VTW_0058VTW0.16560Single stack bend (H)1A LSU rRNAG212A213G214*C183C184cWWcWW
15 IL_5J7L_2665J7L0.24040Single stack bendDA LSU rRNAG940A941G942*C837C838cWWncWW
16 IL_8VTW_0238VTW0.24300Single stack bend (H)1A LSU rRNAG940A941G942*C837C838cWWcWW
17 IL_4WF9_0284WF90.29990Single stack bendX LSU rRNAG984A985G986*C882C883cWWcWW
18 IL_7A0S_0227A0S0.26440Single stack bendX LSU rRNAG951A952G953*C850C851cWWcWW
19 IL_5IBB_3405IBB0.29970Single base bend1L tRNAG63U64C65*G50C51cWWcWW
20 IL_3MOJ_0043MOJ0.42250Single stack bendA LSU rRNAC2540A2541A2542*U2522G2523cWWcWW
21 IL_6FZ0_0016FZ00.39770Single stack bendASAM-V riboswitchC46U47A48*U20G21cWWcWW
22 IL_2QWY_0082QWY0.40880Single stack bendCSAM-II riboswitchC43U44A45*U21G22cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAG*CC10
CCU*AG3
UAG*CA2
CUA*UG2
(OMC)CU*AG1
AAG*CU1
GAU*AC1
GUC*GC1
CAA*UG1
Non-Watson-Crick part of the motif
SequenceCounts
A*15
C*4
U*3

Release history

Release3.88
Date2024-09-11
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Single stack bend (14)
  • Single stack bend (H) (5)
  • (2)
  • Single base bend (1)
  • Basepair signature
    cWW-L-cWW
    Heat map statistics
    Min 0.08 | Avg 0.36 | Max 0.74
    Help

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