Motif IL_12068.1 Version IL_12068.1 of this group appears in releases 0.7 to 0.9
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2XZM_026 | 2XZM | 0.0000 | 0 | A | G | 477 | G | 478 | * | U | 493 | A | 494 | C | 495 | cWW | ncWW | ntSH |
| 2 | IL_3G78_005 | 3G78 | 0.6347 | 2 | A | G | 128 | G | 129 | * | U | 234 | G | 236 | U | 238 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GG*UAC | 1 |
| GG*UUGAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *A | 1 |
| *UGA | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in IL_12068.1 | Only in the parent motif |
|---|---|---|---|
| IL_30650.1 Compare | IL_2XZM_026 | IL_3G78_005 | |
| IL_10804.1 Compare | IL_3G78_005 | IL_2XZM_026 | IL_3RW6_007, IL_3RW6_003 |
Children motifs
| Child motif | Common motif instances | Only in IL_12068.1 | Only in the child motif |
|---|---|---|---|
| IL_69901.1 Compare | IL_2XZM_026 | IL_3G78_005 | IL_3U5H_107 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-cWW
- Heat map statistics
- Min 0.63 | Avg 0.32 | Max 0.63
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