Motif IL_12147.1 Version IL_12147.1 of this group appears in releases 1.13 to 1.14
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4BPP_063 | 4BPP | 0.0000 | 0 | A | 18S RRNA | A | 1206 | C | 1207 | A | 1208 | * | U | 1221 | U | 1222 | U | 1223 | cWW | ntHS | cWW |
| 2 | IL_1LNG_001 | 1LNG | 0.9059 | 1 | B | SRP S RNA | U | 175 | A | 177 | C | 178 | * | G | 152 | A | 153 | G | 154 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACA*UUU | 1 |
| UAAC*GAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*U | 1 |
| AA*A | 1 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in IL_12147.1 | Only in the parent motif |
|---|---|---|---|
| IL_21644.1 Compare | IL_4BPP_063 | IL_1LNG_001 | IL_4J5V_004 |
| IL_12024.1 Compare | IL_1LNG_001 | IL_4BPP_063 | IL_3BNL_003 |
Children motifs
| Child motif | Common motif instances | Only in IL_12147.1 | Only in the child motif |
|---|---|---|---|
| IL_22658.1 Compare | IL_4BPP_063, IL_1LNG_001 | IL_4M4O_004, IL_4M6D_013 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-cWW
- Heat map statistics
- Min 0.91 | Avg 0.45 | Max 0.91
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