Motif IL_21644.1 Version IL_21644.1 of this group appears in releases 1.12 to 1.12
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4BPP_063 | 4BPP | 0.0000 | 0 | A | 18S RRNA | A | 1206 | C | 1207 | A | 1208 | * | U | 1221 | U | 1222 | U | 1223 | cWW | ntHS | cWW |
| 2 | IL_4J5V_004 | 4J5V | 0.7128 | 0 | B | RNA (19-mer) | G | 209||||4_555 | C | 210||||4_555 | C | 211||||4_555 | * | G | 209 | C | 210 | C | 211 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACA*UUU | 1 |
| GCC*GCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| C*U | 1 |
| C*C | 1 |
Release history
| Release | 1.12 |
|---|---|
| Date | 2014-03-01 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_21644.1 | Only in the parent motif |
|---|---|---|---|
| IL_37104.2 Compare | IL_4BPP_063 | IL_4J5V_004 | IL_2QBG_082, IL_3V2F_079, IL_4IOA_082, IL_4BPP_026, IL_3U5H_104, IL_4IOA_077, IL_3U5H_100, IL_1S72_076, IL_3V2F_012, IL_4A1B_102 |
Children motifs
| Child motif | Common motif instances | Only in IL_21644.1 | Only in the child motif |
|---|---|---|---|
| IL_63133.1 Compare | IL_4J5V_004 | IL_4BPP_063 | |
| IL_12147.1 Compare | IL_4BPP_063 | IL_4J5V_004 | IL_1LNG_001 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-cWW
- Heat map statistics
- Min 0.71 | Avg 0.36 | Max 0.71
Coloring options: