#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 61-62-53-4
1 IL_4RUM_0014RUM0.28641Isolated non-canonical cWWANiCo riboswitch RNAG13A14C16*G88A89C90cWWcwWcWW
2 IL_8VTW_0408VTW0.20091Isolated non-canonical cWW (H)1A LSU rRNAG1031A1032G1034*C1121G1122C1123cWWcWWcWW
3 IL_5J7L_2825J7L0.20991Isolated non-canonical cWWDA LSU rRNAG1031A1032G1034*C1121G1122C1123cWWcWWcWW
4 IL_7A0S_0387A0S0.22121Isolated non-canonical cWWX LSU rRNAG1042A1043G1045*C1132G1133C1134cWWncWWcWW
5 IL_4WF9_0414WF90.16831Isolated non-canonical cWWX LSU rRNAG1075A1076G1078*C1165G1166C1167cWWncWWcWW
6 IL_4K31_0034K310.00001Isolated non-canonical cWWB+CRNA (23-mer)A16A17G19*C7G8U9cWWcWWcWW
7 IL_4K31_0024K310.08091Isolated non-canonical cWWC+BRNA (23-mer)A16A17G19*C7G8U9cWWcWWcWW
8 IL_6TFF_0036TFF0.15471AnadA RNAC34A35C37*G23G24G25cWWcWWcWW
9 IL_7D7W_0037D7W0.26701A18GAAA (52-MER)C34A35C37*G23G24G25cWWcWWcWW
10 IL_7D7V_0037D7V0.31351AnadA RNAC41A42U44*G22G23G24cWWcWWcWW
11 IL_5J7L_0095J7L0.33501Isolated non-canonical cWWAA SSU rRNAG128A129A131*U231G232C233cWWcWWcWW
12 IL_1U6B_0011U6B0.37611Isolated non-canonical cWWB197-MERG19C20G22*C29A30C31cWWncWWcWW
13 IL_8D29_0118D290.38793FRNA (34-MER)G20C21U25*A10G11C12cWWncWWcWW
14 IL_4V88_5074V880.42851A6 SSU rRNAG957U958U960*G868A869C870cWWncWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAUG*CGC4
AAAG*CGU2
CAGC*GGG2
GAGC*GAC1
CAGU*GGG1
GAAA*UGC1
GCCG*CAC1
GCCCUU*AGC1
GUUU*GAC1
Non-Watson-Crick part of the motif
SequenceCounts
AU*G4
AA*G3
AG*G3
AG*A1
CC*A1
CCCU*G1
UU*A1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Isolated non-canonical cWW (8)
  • (5)
  • Isolated non-canonical cWW (H) (1)
  • Basepair signature
    cWW-cWW-cWW
    Heat map statistics
    Min 0.08 | Avg 0.29 | Max 0.54
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