#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 91-92-85-86-7
1 IL_4V9F_0594V9F0.228110 LSU rRNAG1728A1729C1731A1732A1733C1734*G2045G2046C2047ncWWtHScWW
2 IL_7A0S_0597A0S0.07800X LSU rRNAG1668A1669G1670A1671A1672C1673*G1987A1988C1989cWWtHScWW
3 IL_8VTW_0638VTW0.056901A LSU rRNAG1651A1652G1653A1654A1655C1656*G2004A2005C2006cWWtHScWW
4 IL_5J7L_3045J7L0.00000DA LSU rRNAG1651A1652G1653A1654A1655C1656*G2004A2005C2006tHScWW
5 IL_4WF9_0624WF90.11340X LSU rRNAG1695C1696G1697A1698A1699C1700*G2031A2032C2033cWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAGAAC*GAC3
GAGCAAC*GGC1
GCGAAC*GAC1
Non-Watson-Crick part of the motif
SequenceCounts
AGAA*A3
AGCAA*G1
CGAA*A1

Release history

Release3.873.883.89
Date2024-08-142024-09-112024-10-09
StatusUpdated, 1 parentExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (5)
  • Basepair signature
    cWW-L-tHS-L-cWW-L
    Heat map statistics
    Min 0.06 | Avg 0.12 | Max 0.25
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.9992 s