Motif IL_14768.1 Version IL_14768.1 of this group appears in releases 3.77 to 3.79
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5TBW_072 | 5TBW | 0.0000 | 1 | 1 | LSU rRNA | U | 1702 | U | 1703 | A | 1704 | U | 1705 | C | 1706 | A | 1707 | * | U | 1737 | C | 1738 | U | 1739 | A | 1741 | U | 1742 | G | 1743 | cWW | cwW | ntHW | ncBW | cWW | |
| 2 | IL_4V88_421 | 4V88 | 0.8425 | 0 | Triple sheared related | A6 | SSU rRNA | G | 703 | C | 704 | U | 705 | A | 706 | A | 707 | C | 708 | * | G | 730 | C | 731 | G | 732 | A | 733 | A | 734 | C | 735 | cWW | ncWW | ntHS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAUCA*UCUUAUG | 1 |
| GCUAAC*GCGAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUC*CUUAU | 1 |
| CUAA*CGAA | 1 |
- Annotations
-
- Triple sheared related (1)
- (1)
- Basepair signature
- cWW-cWW-L-R-tHS-cWW-cWW
- Heat map statistics
- Min 0.84 | Avg 0.42 | Max 0.84
Coloring options: