#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8 9 101-102-93-84-74-85-6
1 IL_5XTM_0065XTM0.83542DRNA (47-MER)G8A9U10A13A14*U35A36A37C38C39cWWncWWacWwcWW
2 IL_6CZR_4096CZR0.000001a SSU rRNAG657G658A659A660U661*G697G698A699A700C701cWWcWWncWwncWWa
3 IL_5J7L_3615J7L0.11380AA SSU rRNAA673G674A675A676U677*G713G714A715A716U717cWWcWWncWwcWWncWWa

3D structures

Complete motif including flanking bases
SequenceCounts
GAUGAAA*UAACC1
GGAAU*GGAAC1
AGAAU*GGAAU1
Non-Watson-Crick part of the motif
SequenceCounts
GAA*GAA2
AUGAA*AAC1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-cWW-L-R-cWW-cWW
    Heat map statistics
    Min 0.11 | Avg 0.40 | Max 0.85
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