#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9break 10 111-115-89-10
1 IL_7SZU_0047SZU0.11510RRNA aptamerC9C10A11A12U13C14G15U16A17*U59G60cWWtWHncWW
2 IL_7EOG_0037EOG0.00000APepper (49-MER)C28C29A30A31U32C33G34U35A36*U14G15cWWtWHcWW
3 IL_7EOM_0037EOM0.06760APepper (49-MER)C28C29A30A31U32C33G34U35A36*U14G15cWWntWHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CCAAUCGUA*UG3
Non-Watson-Crick part of the motif
SequenceCounts
CAAUCGU*3

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusUpdated, 1 parentExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-L-cWW-L-L-tWH-R-L
    Heat map statistics
    Min 0.07 | Avg 0.07 | Max 0.13
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.1256 s