#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3 4 5break 6 7 8 9 101-102-93-84-75-6
1 IL_1FJG_0231FJG0.55310tSH-tHW-tHS (H)AU580G581U582A583G584*U757G758A759G760G761cWWtWHtHScWW
2 IL_3U5F_0533U5F0.556106C1010G1011U1012A1013G1014*C990G991A992A993G994cWWtSHtWHtHScWW
3 IL_2QWY_0072QWY0.53090tSH-tHW-tHSCC16G17U18A19U20*A46A47A48A49G50cWWtSHtWHtHScWW
4 IL_1FJG_0331FJG0.21730tSH-tHW-tHS (H)AG799G800U801A802G803*C779A780A781A782C783cWWtSHtWHtHScWW
5 IL_2AW7_0402AW70.30430AG799G800U801A802G803*C779A780A781A782C783cWWtSHtWHtHScWW
6 IL_2QBG_0522QBG0.29500BC1370G1371U1372A1373G1374*C1357G1358A1359G1360G1361cWWtSHtWHtHScWW
7 IL_1S72_0551S720.25420tSH-tHW-tHS (H)0G1542G1543U1544C1545G1546*U1639C1640A1641A1642C1643cWWtSHtWHtHScWW
8 IL_3U5F_0353U5F0.219306C627G628U629A630G631*U968C969A970A971G972cWWtSHtWHtHScWW
9 IL_3UXR_0503UXR0.20050AC1370G1371U1372A1373G1374*U1357G1358A1359A1360G1361cWWtSHntWWtHScWW
10 IL_2QBG_0582QBG0.18020BU1474G1475U1476A1477G1478*U1513G1514A1515G1516G1517cWWtWHtHScWW
11 IL_2QWY_0042QWY0.21410BC16G17U18A19U20*A46A47A48A49G50cWWtWHtHScWW
12 IL_2ZJR_0502ZJR0.20410XC1383G1384C1385A1386G1387*U1370G1371A1372G1373G1374cWWtSHtWHtHScWW
13 IL_2AW7_0302AW70.00000AC580G581C582A583G584*U757C758A759G760G761cWWtSHtWHtHScWW
14 IL_2XZM_0352XZM0.18890AC621G622U623A624G625*U946C947A948A949G950cWWtSHtHSncWW
15 IL_1S72_0231S720.25400tSH-tHW-tHS (H)0C705G706C707A708G709*C719G720A721G722G723cWWtSHtWHtHScWW
16 IL_2XZM_0492XZM0.41810AC988G989U990A991G992*C968A969A970A971G972cWWtSHtWHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGUAG*UGAGG2
CGUAU*AAAAG2
GGUAG*CAAAC2
CGUAG*UCAAG2
CGUAG*CGAAG1
CGUAG*CGAGG1
GGUCG*UCAAC1
CGUAG*UGAAG1
CGCAG*UGAGG1
CGCAG*UCAGG1
CGCAG*CGAGG1
CGUAG*CAAAG1
Non-Watson-Crick part of the motif
SequenceCounts
GUA*AAA5
GUA*GAG3
GUA*GAA2
GUA*CAA2
GCA*GAG2
GUC*CAA1
GCA*CAG1
Annotations
  • (11)
  • tSH-tHW-tHS (H) (4)
  • tSH-tHW-tHS (1)
  • Basepair signature
    10_cWW-tSH-tWH-tHS-cWW
    Heat map statistics
    Min 0.09 | Avg 0.35 | Max 0.76
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