Motif IL_25181.1 Version IL_25181.1 of this group appears in releases 0.6 to 1.13
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-12 | 4-9 | 5-8 | 6-7 | 10-11 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5H_080 | 3U5H | 0 | 0 | 5 | 25S rRNA | U | 1702 | U | 1703 | A | 1704 | U | 1705 | C | 1706 | A | 1707 | * | U | 1737 | C | 1738 | U | 1739 | U | 1740 | A | 1741 | U | 1742 | G | 1743 | cWW | cwW | tHW | ncBW | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAUCA*UCUUAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUC*CUUAU | 1 |
Release history
| Release | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_25181.1 | Only in the child motif |
|---|---|---|---|
| IL_89252.1 Compare | IL_3U5H_080 | IL_1VW3_094, IL_1VW3_051 |
- Annotations
- Basepair signature
- cWW-cWW-L-R-R-tHW-bif-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: