#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8 91-92-32-73-75-6
1 IL_7SZU_0027SZU0.24390RRNA aptamerU21G22U23C24G25*C52U53G54G55cWWcSHntSHcWwcWW
2 IL_7EOM_0027EOM0.00000APepper (49-MER)U40G41U42C43G44*C7U8G9G10
3 IL_7EOG_0027EOG0.05910APepper (49-MER)U40G41U42C43G44*C7U8G9G10

3D structures

Complete motif including flanking bases
SequenceCounts
UGUCG*CUGG3
Non-Watson-Crick part of the motif
SequenceCounts
GUC*UG3

Release history

Release3.843.853.863.873.883.89
Date2024-05-222024-06-192024-07-172024-08-142024-09-112024-10-09
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-cSH-R-cSH-cWW-cWW
    Heat map statistics
    Min 0.06 | Avg 0.12 | Max 0.25
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.8662 s