Motif IL_27892.1 Version IL_27892.1 of this group appears in releases 1.0 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 2-4 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2XZM_053 | 2XZM | 0.0000 | 0 | A | 18S RRNA | A | 1030 | A | 1031 | U | 1032 | * | G | 1037 | U | 1038 | cWW | ncWW | ncWW |
| 2 | IL_3U5H_107 | 3U5H | 0.3831 | 1 | 5 | 25S rRNA | G | 2770 | U | 2771 | C | 2773 | * | G | 2787 | C | 2788 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAU*GU | 1 |
| GUCC*GC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A* | 1 |
| UC* | 1 |
Release history
| Release | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|---|
| Date | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_27892.1 | Only in the parent motif |
|---|---|---|---|
| IL_10005.1 Compare | IL_2XZM_053 | IL_3U5H_107 | IL_4A1B_069, IL_1FJG_012, IL_1S72_017 |
| IL_69901.1 Compare | IL_3U5H_107 | IL_2XZM_053 | IL_2XZM_026 |
Children motifs
| Child motif | Common motif instances | Only in IL_27892.1 | Only in the child motif |
|---|---|---|---|
| IL_68767.1 Compare | IL_3U5H_107 | IL_2XZM_053 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.38 | Avg 0.19 | Max 0.38
Coloring options: