Motif IL_32080.1 Version IL_32080.1 of this group appears in releases 0.5 to 0.8
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2XZM_067 | 2XZM | 0 | 2 | A | 18S RRNA | U | 1248 | G | 1249 | G | 1250 | * | U | 1401 | C | 1402 | G | 1404 | U | 1405 | A | 1407 | cWW | ncWB | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGG*UCUGUGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*CUGUG | 1 |
Release history
| Release | 0.5 | 0.6 | 0.7 | 0.8 |
|---|---|---|---|---|
| Date | 2011-12-08 | 2012-04-02 | 2013-02-17 | 2013-02-17 |
| Status | New id, no parents | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_32080.1 | Only in the child motif |
|---|---|---|---|
| IL_54420.1 Compare | IL_2XZM_067 | IL_2XZM_073, IL_1FJG_063, IL_3U5F_068, IL_4GMA_007, IL_4GXY_009 |
- Annotations
-
- (1)
- Basepair signature
- cWW-bif-R-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: