Motif IL_34739.2 Version IL_34739.2 of this group appears in releases 3.85 to 3.85
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | break | 16 | 17 | 18 | 19 | 20 | 1-20 | 2-19 | 2-20 | 6-7 | 15-16 | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4N0T_002 | 4N0T | 0.0000 | 6 | B | U6 snRNA | G | 39 | A | 40 | A | 41 | C | 43 | A | 44 | A | 45 | U | 46 | A | 47 | C | 48 | G | 50 | A | 51 | G | 52 | A | 53 | A | 56 | A | 59 | * | U | 88 | U | 89 | U | 90 | A | 91 | C | 92 | cWW | tWW | ncSH | cWW | |
| 2 | IL_6ASO_001 | 6ASO | 0.2358 | 6 | I | U6 snRNA | G | 39 | A | 40 | A | 41 | C | 43 | A | 44 | A | 45 | U | 46 | A | 47 | C | 48 | G | 50 | A | 51 | G | 52 | A | 53 | A | 56 | A | 59 | * | U | 88 | U | 89 | U | 90 | A | 91 | C | 92 | cWW | tWW | ntWW | ncSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAACAAUACAGAGAUGAUCA*UUUAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAACAAUACAGAGAUGAUC*UUA | 2 |
Release history
| Release | 3.85 |
|---|---|
| Date | 2024-06-19 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tWW-L-R-L-R-L-cWW-L-L-R-L-R-L-R-L-R
- Heat map statistics
- Min 0.24 | Avg 0.12 | Max 0.24
Coloring options: