Motif IL_37172.1 Version IL_37172.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-7 | 1-10 | 6-7 | 7-9 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_467 | 8C3A | 0.0000 | 4 | 180 degree turn | CM | SSU rRNA | G | 1474 | U | 1475 | A | 1478 | A | 1479 | G | 1480 | C | 1481 | * | G | 1500 | A | 1501 | A | 1502 | C | 1505 | ntSS | cWW | cWW | |
| 2 | IL_8P9A_449 | 8P9A | 0.6197 | 3 | 180 degree turn (H) | sR | SSU rRNA | G | 1488 | U | 1489 | C | 1490 | U | 1491 | A | 1492 | C | 1494 | * | G | 1513 | U | 1514 | A | 1515 | C | 1518 | cWW | cWW | ncSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAUAAGC*GAAAUC | 1 |
| GUCUAAC*GUAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUAAG*AAAU | 1 |
| UCUAA*UAAU | 1 |
- Annotations
-
- 180 degree turn (1)
- 180 degree turn (H) (1)
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Heat map statistics
- Min 0.62 | Avg 0.31 | Max 0.62
Coloring options: