Motif IL_38882.1 Version IL_38882.1 of this group appears in releases 3.80 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 1-18 | 5-16 | 6-15 | 6-17 | 7-14 | 8-13 | 10-11 | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8C3A_453 | 8C3A | 0.0000 | 2 | CM | SSU rRNA | A | 1209 | U | 1210 | A | 1211 | A | 1212 | G | 1214 | A | 1215 | U | 1216 | U | 1217 | G | 1218 | A | 1219 | * | U | 1236 | C | 1237 | U | 1238 | U | 1239 | G | 1240 | A | 1241 | U | 1242 | U | 1244 | cWW | tSH | ntHS | ncWH | cWw | ncWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUAAGGAUUGA*UCUUGAUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAGGAUUG*CUUGAUU | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-tSS-R-L-tSH-R-L-cWW-R-L-R-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: