#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 91-97-8
1 IL_3P59_0013P590.00000A+BRNA (15-mer) + RNA (10-mer)G52A53A54C55U56A57C58*G110C111cWWcWW
2 IL_2PN4_0022PN40.55980A+BRNA (24-mer) + RNA (20-mer)G52A53A54C55U56A57C58*G110C111cWWcWW
3 IL_2PN4_0072PN40.69040C+DRNA (24-mer) + RNA (20-mer)G52A53A54C55U56A57C58*G110C111cWWcWW
4 IL_2NOK_0052NOK0.80480C+DRNA (24-mer) + RNA (20-mer)G52A53A54C55U56A57C58*G110C111cWWcWW
5 IL_2NOK_0012NOK0.80130A+BRNA (24-mer) + RNA (20-mer)G52A53A54C55U56A57C58*G110C111cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAACUAC*GC5
Non-Watson-Crick part of the motif
SequenceCounts
AACUA*5

Release history

Release0.10.20.30.40.50.6
Date2011-12-082011-12-082011-12-082011-12-082011-12-082012-04-02
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_39526.1Only in the child motif
IL_39526.2
Compare
IL_2PN4_002, IL_2NOK_005, IL_3P59_001, IL_2NOK_001IL_2PN4_007
Annotations
  • (5)
  • Basepair signature
    09_cWW------cWW
    Heat map statistics
    Min 0.04 | Avg 0.39 | Max 0.80
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.3355 s