Motif IL_41009.1 Version IL_41009.1 of this group appears in releases 0.1 to 0.9
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 1-11 | 5-9 | 5-11 | 7-8 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3G78_006 | 3G78 | 0 | 2 | A | Group II catalytic intron D1-D4-1 | A | 149 | U | 150 | A | 151 | G | 153 | A | 154 | G | 155 | G | 156 | * | U | 221 | A | 222 | A | 224 | U | 225 | cWW | tHW | tSs | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUAUGAGG*UAAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUGAG*AAA | 1 |
Release history
| Release | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 0.9 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-L-L-L-tSS-tHW-L-R-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: