Motif IL_41341.1 Version IL_41341.1 of this group appears in releases 1.1 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 2-6 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3U5F_006 | 3U5F | 0 | 0 | 6 | 18S rRNA | U | 58 | C | 59 | U | 60 | A | 61 | A | 62 | G | 63 | * | C | 87 | U | 88 | G | 89 | cWW | ncWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUAAG*CUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUAA*U | 1 |
Release history
| Release | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|
| Date | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_41341.1 | Only in the parent motif |
|---|---|---|---|
| IL_21304.1 Compare | IL_3U5F_006 | IL_2XZM_006, IL_2QBG_082, IL_3V2F_079, IL_2ZJR_078, IL_3U5H_085, IL_3U5H_100, IL_1S72_076, IL_3V2F_012, IL_1S72_062, IL_4A1B_081 |
Children motifs
| Child motif | Common motif instances | Only in IL_41341.1 | Only in the child motif |
|---|---|---|---|
| IL_12685.1 Compare | IL_3U5F_006 | IL_3U5F_012 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-cWH-L-L-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: