Motif IL_41397.2 Version IL_41397.2 of this group appears in releases 0.7 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_103 | 2QBG | 0.0000 | 2 | B | 23S rRNA | U | 2687 | G | 2688 | C | 2691 | * | G | 2718 | G | 2719 | U | 2720 | A | 2721 | G | 2722 | cWW | tSH | cWW | |
| 2 | IL_2ZJR_097 | 2ZJR | 0.2037 | 2 | X | LSU rRNA | U | 2666 | C | 2667 | C | 2670 | * | G | 2698 | G | 2699 | U | 2700 | A | 2701 | G | 2702 | cWW | ntSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUUC*GGUAG | 1 |
| UCUCC*GGUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUU*GUA | 1 |
| CUC*GUA | 1 |
Release history
| Release | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 |
|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_41397.2 | Only in the parent motif |
|---|---|---|---|
| IL_41397.1 Compare | IL_2QBG_103, IL_2ZJR_097 | IL_3UXR_101 |
Children motifs
| Child motif | Common motif instances | Only in IL_41397.2 | Only in the child motif |
|---|---|---|---|
| IL_69536.1 Compare | IL_2QBG_103 | IL_2ZJR_097 | IL_4IOA_098 |
- Annotations
- Basepair signature
- cWW-L-R-R-R-cWW
- Heat map statistics
- Min 0.20 | Avg 0.10 | Max 0.20
Coloring options: