Motif IL_41507.1 Version IL_41507.1 of this group appears in releases 3.80 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_386 | 4V88 | 0.1489 | 1 | Triple sheared related | A6 | SSU rRNA | U | 37 | C | 38 | A | 39 | A | 40 | A | 41 | * | U | 466 | G | 467 | C | 469 | A | 470 | A | 471 | cWW | cWW | tHS | cWW | |
| 2 | IL_8C3A_394 | 8C3A | 0.0000 | 1 | Triple sheared related | CM | SSU rRNA | U | 37 | C | 38 | A | 39 | A | 40 | A | 41 | * | U | 464 | G | 465 | C | 467 | A | 468 | A | 469 | cWW | cWW | tSH | tHS | cWW |
| 3 | IL_7A0S_056 | 7A0S | 0.4911 | 0 | Triple sheared | X | LSU rRNA | C | 1529 | U | 1530 | C | 1531 | A | 1532 | G | 1533 | * | C | 1491 | A | 1492 | A | 1493 | G | 1494 | G | 1495 | cWW | tHS | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCAAA*UGACAA | 2 |
| CUCAG*CAAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAA*GACA | 2 |
| UCA*AAG | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Triple sheared related (2)
- Triple sheared (1)
- Basepair signature
- cWW-cWW-L-R-tHS-cWW
- Heat map statistics
- Min 0.15 | Avg 0.26 | Max 0.51
Coloring options: