Motif IL_43424.1 Version IL_43424.1 of this group appears in releases 4.14 to 4.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 1-5 | 1-16 | 7-12 | 8-11 | 9-10 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8CRE_436 | 8CRE | 0.0000 | 1 | Kink-turn related (H) | CM | SSU rRNA | C | 895 | U | 896 | U | 897 | G | 899 | A | 900 | U | 901 | U | 902 | U | 903 | A | 904 | * | U | 878 | U | 879 | G | 880 | U | 881 | C | 882 | A | 883 | G | 884 | ncsS | cWW | ncWWa | cWH | cWW |
| 2 | IL_9SUM_182 | 9SUM | 0.1672 | 1 | CA | SSU rRNA | C | 880 | U | 881 | U | 882 | G | 884 | A | 885 | U | 886 | U | 887 | U | 888 | A | 889 | * | U | 863 | U | 864 | G | 865 | U | 866 | C | 867 | A | 868 | G | 869 | ncsS | cWW | ncWWa | ncWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUGGAUUUA*UUGUCAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGGAUUU*UGUCA | 2 |
Release history
| Release | 4.14 |
|---|---|
| Date | 2026-09-09 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Kink-turn related (H) (1)
- (1)
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-cWH-L-cWW
- Heat map statistics
- Min 0.17 | Avg 0.08 | Max 0.17
Coloring options: