Motif IL_45592.2 Version IL_45592.2 of this group appears in releases 1.17 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-7 | 3-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4CUX_051 | 4CUX | 0.1961 | 3 | 2 | 18S RRNA | C | 1034 | G | 1035 | A | 1036 | * | U | 1095 | U | 1097 | U | 1099 | G | 1101 | cWW | cWW |
| 2 | IL_3J7A_048 | 3J7A | 0.0000 | 3 | A | SSU rRNA | C | 1103 | G | 1104 | A | 1105 | * | U | 1196 | U | 1198 | U | 1200 | G | 1202 | cWW | cWW |
| 3 | IL_3U5F_054 | 3U5F | 0.1574 | 3 | 6 | 18S rRNA | C | 1034 | G | 1035 | A | 1036 | * | U | 1095 | U | 1097 | U | 1099 | G | 1101 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGA*UCUUUGG | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*CUUUG | 3 |
Release history
Parent motifs
| Parent motif | Common motif instances | Only in IL_45592.2 | Only in the parent motif |
|---|---|---|---|
| IL_45592.1 Compare | IL_4CUX_051, IL_3U5F_054 | IL_3J7A_048 | IL_4IOA_023 |
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-R-R-cWW
- Heat map statistics
- Min 0.16 | Avg 0.13 | Max 0.22
Coloring options: