#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9break 10 111-114-89-10
1 IL_1MZP_0021MZP0.53652Bfragment of 23S rRNAG6G8U9A10G11G12A13A15G16*C49C50cWWtWHcWW
2 IL_5ML7_0065ML70.00002B23S ribosomal RNAG2151G2153C2154A2155G2156C2157A2158A2160G2161*C2223C2224cWWtWHcWW
3 IL_3U4M_0023U4M0.22552B LSU rRNAG2110G2112U2113A2114G2115G2116A2117A2119G2120*C2178C2179cWWtWHcWW
4 IL_4JRC_0044JRC0.43561BDistal Stem I region of the glyQS T box leader RNAC37G39A40A41G42C43G44A45G46*U68G69cWWtWHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCGUAGGAUAG*CC2
GUGCAGCAUAG*CC1
CCGAAGCGAG*UG1
Non-Watson-Crick part of the motif
SequenceCounts
CGUAGGAUA*2
UGCAGCAUA*1
CGAAGCGA*1

Release history

Release3.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-L-L-tWH-L-L-L-cWW
    Heat map statistics
    Min 0.23 | Avg 0.36 | Max 0.61
    Help

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