Motif IL_47265.1 Version IL_47265.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-9 | 1-11 | 2-10 | 4-5 | 9-11 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4P8Z_003 | 4P8Z | 0.0000 | 2 | A | Lariat capping ribozyme | G | 72 | U | 73 | G | 74 | G | 75 | * | C | 86 | G | 87 | U | 88 | A | 89 | A | 90 | A | 92 | C | 94 | tsS | cWW | ntWW | cWW | |
| 2 | IL_4P95_003 | 4P95 | 0.1044 | 2 | A | RNA (192-MER) | G | 290 | U | 291 | G | 292 | G | 293 | * | C | 304 | G | 305 | U | 306 | A | 307 | A | 308 | A | 310 | C | 312 | tsS | cWW | tWW | cWW | ncSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGG*CGUAACAUC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UG*GUAACAU | 2 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSS-cSS-tWW-L-tSH-R-R-cWW
- Heat map statistics
- Min 0.10 | Avg 0.05 | Max 0.10
Coloring options: