Motif IL_48802.1 Version IL_48802.1 of this group appears in releases 3.88 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 1-14 | 8-11 | 9-10 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5U30_004 | 5U30 | 0.0000 | 2 | B | sgRNA | U | 28 | G | 29 | U | 30 | G | 31 | C | 32 | C | 33 | A | 35 | G | 37 | G | 38 | * | C | 54 | A | 55 | A | 56 | A | 57 | G | 58 | ncWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUGCCAAUGG*CAAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUGCCAAUG*AAA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-L-R-L-R-L-R-L-L-L-L-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: