Motif IL_49527.1 Version IL_49527.1 of this group appears in releases 1.5 to 1.15
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-7 | 3-6 | 4-5 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_4BPP_062 | 4BPP | 0 | 0 | A | 18S RRNA | A | 1202 | U | 1203 | U | 1204 | G | 1205 | * | C | 1224 | U | 1225 | U | 1226 | G | 1227 | A | 1228 | U | 1229 | cWW | cWw | cWw | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
AUUG*CUUGAU | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UU*UUGA | 1 |
Release history
Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 |
---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 |
Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_49527.1 | Only in the child motif |
---|---|---|---|
IL_91102.1 Compare | IL_4BPP_062 | IL_3J7A_023, IL_1VWW_004 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-R-cWW-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: