Motif IL_49969.1 Version IL_49969.1 of this group appears in releases 3.54 to 3.61
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_026 | 5J7L | 0.2149 | 5 | AA | SSU rRNA | C | 880 | G | 881 | * | C | 569 | G | 575 | cWW | cWW |
| 2 | IL_4LFB_022 | 4LFB | 0.1878 | 5 | A | SSU rRNA | C | 880 | G | 881 | * | C | 569 | G | 575 | cWW | cWW |
| 3 | IL_6CZR_134 | 6CZR | 0.0000 | 5 | 1a | SSU rRNA | C | 858 | G | 859 | * | C | 553 | G | 559 | cWW | cWW |
| 4 | IL_6JOO_001 | 6JOO | 0.4393 | 3 | B | Guide RNA | G | 57 | C | 58 | * | G | 61 | C | 65 | cWW | cWW |
| 5 | IL_4WF9_096 | 4WF9 | 0.6541 | 2 | X | LSU rRNA | C | 2539 | A | 2540 | * | U | 2598 | G | 2601 | cWW | cWW |
| 6 | IL_5J7L_341 | 5J7L | 0.6425 | 2 | DA | LSU rRNA | C | 2512 | A | 2513 | * | U | 2571 | G | 2574 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CG*CGUAAAG | 3 |
| CA*UACG | 2 |
| GC*GUUUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GUAAA | 3 |
| *AC | 2 |
| *UUU | 1 |
Release history
| Release | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 |
|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 |
| Status | New id, > 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: