#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 71-73-64-5
1 IL_1FJG_0411FJG01Isolated cWS basepair (H)A SSU rRNAU1052G1053A1055U1056*A1204U1205G1206cWWncWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGCAU*AUG1
Non-Watson-Crick part of the motif
SequenceCounts
GCA*U1

Release history

Release1.51.61.71.81.91.101.111.121.13
Date2013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Children motifs

Child motifCommon motif instancesOnly in IL_50911.1Only in the child motif
IL_67813.1
Compare
IL_1FJG_041IL_2AW7_049, IL_1S72_046, IL_4NVV_044, IL_3U5H_062, IL_3U5F_093, IL_4IOA_043, IL_2QBG_045, IL_4BPP_065, IL_3U5H_052, IL_3U5F_065, IL_4NVV_032, IL_3U5F_067, IL_1VW3_035, IL_1VW3_070
Annotations
  • Isolated cWS basepair (H) (1)
  • Basepair signature
    cWW-L-cWS-cWW
    Heat map statistics
    Min 0.00 | Avg 0.00 | Max 0.00
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.3641 s