Motif IL_50911.1 Version IL_50911.1 of this group appears in releases 1.5 to 1.13
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 3-6 | 4-5 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_1FJG_041 | 1FJG | 0 | 1 | Isolated cWS basepair (H) | A | SSU rRNA | U | 1052 | G | 1053 | A | 1055 | U | 1056 | * | A | 1204 | U | 1205 | G | 1206 | cWW | ncWS | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGCAU*AUG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GCA*U | 1 |
Release history
Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
---|---|---|---|---|---|---|---|---|---|
Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
Parent motif | Common motif instances | Only in IL_50911.1 | Only in the parent motif |
---|---|---|---|
IL_40090.4 Compare | IL_1FJG_041 | IL_2AW7_049, IL_1S72_046, IL_3U5H_052, IL_4KYY_002, IL_3U5H_062, IL_3U5F_093, IL_4IOA_043, IL_2QBG_045, IL_3V2F_030, IL_3U5F_067, IL_3V2F_042 |
Children motifs
Child motif | Common motif instances | Only in IL_50911.1 | Only in the child motif |
---|---|---|---|
IL_67813.1 Compare | IL_1FJG_041 | IL_2AW7_049, IL_1S72_046, IL_4NVV_044, IL_3U5H_062, IL_3U5F_093, IL_4IOA_043, IL_2QBG_045, IL_4BPP_065, IL_3U5H_052, IL_3U5F_065, IL_4NVV_032, IL_3U5F_067, IL_1VW3_035, IL_1VW3_070 |
- Annotations
-
- Isolated cWS basepair (H) (1)
- Basepair signature
- cWW-L-cWS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: