Motif IL_52844.1 Version IL_52844.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | 4-5 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1FJG_055 | 1FJG | 0.0000 | 0 | A | SSU rRNA | G | 1401 | C | 1402 | C | 1403 | C | 1404 | * | G | 1497 | U | 1498 | A | 1499 | A | 1500 | C | 1501 | cWW | cWW | cSW | cWW | cSH |
| 2 | IL_2AW7_061 | 2AW7 | 0.0742 | 0 | A | SSU rRNA | G | 1401 | C | 1402 | C | 1403 | C | 1404 | * | G | 1497 | U | 1498 | A | 1499 | A | 1500 | C | 1501 | cWW | cWW | cSW | cWW | cSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCCC*GUAAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CC*UAA | 2 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_52844.1 | Only in the parent motif |
|---|---|---|---|
| IL_75673.1 Compare | IL_1FJG_055 | IL_2AW7_061 | IL_3BNQ_008, IL_1FJG_008, IL_3BNQ_002, IL_2O3V_002 |
Children motifs
| Child motif | Common motif instances | Only in IL_52844.1 | Only in the child motif |
|---|---|---|---|
| IL_83451.1 Compare | IL_1FJG_055, IL_2AW7_061 | IL_2XZM_084, IL_3CUN_001, IL_3U5F_081 |
Coloring options: