#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4break 5 6 7 8 91-92-83-74-56-7
1 IL_1FJG_0551FJG0.00000A SSU rRNAG1401C1402C1403C1404*G1497U1498A1499A1500C1501cWWcWWcSWcWWcSH
2 IL_2AW7_0612AW70.07420A16S ribosomal RNAG1401C1402C1403C1404*G1497U1498A1499A1500C1501cWWcWWcSWcWWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
GCCC*GUAAC2
Non-Watson-Crick part of the motif
SequenceCounts
CC*UAA2

Release history

Release0.5
Date2011-12-08
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_52844.1Only in the parent motif
IL_75673.1
Compare
IL_1FJG_055IL_2AW7_061IL_3BNQ_008, IL_1FJG_008, IL_3BNQ_002, IL_2O3V_002

Children motifs

Child motifCommon motif instancesOnly in IL_52844.1Only in the child motif
IL_83451.1
Compare
IL_1FJG_055, IL_2AW7_061IL_2XZM_084, IL_3CUN_001, IL_3U5F_081
Annotations
  • (2)
  • Basepair signature
    Heat map statistics
    Min 0.07 | Avg 0.04 | Max 0.07
    Help

    Coloring options:

    IL_1FJG_055:IL_1FJG_055 = 0IL_1FJG_055:IL_2AW7_061 = 0.0742IL_2AW7_061:IL_1FJG_055 = 0.0742IL_2AW7_061:IL_2AW7_061 = 0IL_1FJG_055IL_2AW7_061Discrepancy0.000.020.040.06
    Copyright 2025 BGSU RNA group. Page generated in 0.0827 s
    Application loaded.