#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7 81-82-73-64-5
1 IL_3BNQ_0053BNQ0.15191B+AA site of human mitochondrial ribosome, A chainC7A8C9C10*G15C16A17G19cWWcWW
2 IL_3BNP_0023BNP0.00001A+BA site of human mitochondrial ribosome, A chain + A site of human mitochondrial ribosome, B chainC6A7C8C9*G13C14A15G17cWWcWW
3 IL_2QBG_0572QBG0.64851B23S rRNAU1468A1469A1470G1471*U1520G1521A1522G1524cWWtHHtHScWW
4 IL_4NVV_0454NVV0.77331A23S Ribosomal RNAU1286A1287A1288G1289*C1247G1248A1249G1251cWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CACC*GCAAG2
UAAG*UGAUG1
CGAUG*UAAG1
Non-Watson-Crick part of the motif
SequenceCounts
AC*CAA2
AA*GAU1
GAU*AA1

Release history

Release1.14
Date2014-04-27
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_55114.1Only in the parent motif
IL_05684.1
Compare
IL_2QBG_057, IL_3BNP_002, IL_3BNQ_005IL_4NVV_045IL_3BNP_003, IL_3V2F_043

Children motifs

Child motifCommon motif instancesOnly in IL_55114.1Only in the child motif
IL_55114.2
Compare
IL_3BNP_002, IL_2QBG_057, IL_4NVV_045, IL_3BNQ_005IL_4CUX_062, IL_3BNP_003
Annotations
  • (4)
  • Basepair signature
    cWW-L-R-tHS-cWW
    Heat map statistics
    Min 0.15 | Avg 0.44 | Max 0.81
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