Motif IL_55287.1 Version IL_55287.1 of this group appears in releases 0.6 to 1.5

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6	break		7		8		9		10	1-10	5-10	6-7
1	IL_4A1B_057	4A1B	0.0000	4	1	26S RRNA	C	1214	U	1215	C	1216	A	1217	A	1220	G	1221	*	C	1341	U	1342	A	1344	G	1346	cWW		cWW
2	IL_3Q1Q_008	3Q1Q	0.9603	1	B	RNase P RNA	U	253	A	254	U	255	U	256	C	257	C	258	*	G	236	G	237	U	239	G	240	cWW	ntsS	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CUCAUCAG*CUGAAG	1
UAUUCC*GGUUG	1

Non-Watson-Crick part of the motif

Sequence	Counts
UCAUCA*UGAA	1
AUUC*GUU	1

Release history

Release	0.6	0.7	0.8	0.9	0.10	0.11	0.12	1.0	1.1	1.2	1.3	1.4	1.5
Date	2012-04-02	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-08	2013-05-04	2013-06-01	2013-07-01	2013-08-03
Status	New id, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

Parent motif	Common motif instances	Only in IL_55287.1	Only in the parent motif
IL_01251.1 Compare	IL_3Q1Q_008	IL_4A1B_057

Children motifs

Child motif	Common motif instances	Only in IL_55287.1	Only in the child motif
IL_25314.1 Compare	IL_3Q1Q_008	IL_4A1B_057
IL_80433.1 Compare	IL_4A1B_057	IL_3Q1Q_008	IL_3U5H_056

Annotations: (2)
Basepair signature: cWW-L-R-R-L-L-L-cWW
Heat map statistics: Min 0.96 | Avg 0.48 | Max 0.96

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