Motif IL_56170.1 Version IL_56170.1 of this group appears in releases 0.1 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-5 | 2-12 | 6-9 | 6-12 | 7-8 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1FJG_021 | 1FJG | 0 | 3 | A | SSU rRNA | G | 515 | U | 516 | G | 517 | C | 518 | C | 519 | A | 520 | G | 521 | * | C | 528 | G | 529 | G | 530 | U | 531 | A | 533 | C | 536 | cWW | cSW | tWH | tHS | ntWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGCCAG*CGGUAAUAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGCCA*GGUAAUA | 1 |
Release history
| Release | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 |
|---|---|---|---|---|---|
| Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_56170.1 | Only in the child motif |
|---|---|---|---|
| IL_28572.1 Compare | IL_1FJG_021 | IL_2XZM_031, IL_3U5F_032, IL_2AW7_028 |
Coloring options: