Motif IL_58586.2 Version IL_58586.2 of this group appears in releases 0.7 to 1.13
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | break | 3 | 4 | 5 | 6 | 1-6 | 2-3 | 3-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3V2F_051 | 3V2F | 0.7630 | 1 | A | U | 1415 | G | 1416 | * | C | 1582 | A | 1583 | A | 1586 | A | 1587 | cWW | cWW | ncSs |
| 2 | IL_1NTB_004 | 1NTB | 0.0000 | 2 | A+B | C | 18 | U | 19 | * | A | 105 | C | 106 | A | 108 | G | 110 | cWW | cWW | |
| 3 | IL_3U5H_088 | 3U5H | 0.6860 | 0 | 5 | G | 1947 | G | 1948 | * | C | 2098 | A | 2099 | A | 2100 | C | 2101 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UG*CACAA | 1 |
| CU*ACCACG | 1 |
| GG*CAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *ACA | 1 |
| *CCAC | 1 |
| *AA | 1 |
Release history
| Release | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_58586.2 | Only in the parent motif |
|---|---|---|---|
| IL_58586.1 Compare | IL_1NTB_004, IL_3U5H_088 | IL_3V2F_051 | IL_3UXR_051 |
Children motifs
| Child motif | Common motif instances | Only in IL_58586.2 | Only in the child motif |
|---|---|---|---|
| IL_58586.3 Compare | IL_1NTB_004, IL_3U5H_088 | IL_3V2F_051 | IL_1VW3_002 |
- Annotations
-
- (3)
- Basepair signature
- cWW-R-R-cWW
- Heat map statistics
- Min 0.69 | Avg 0.54 | Max 0.98
Coloring options: